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Maga (Malgorzata) Rowicka
| Position: |
Postdoctoral Fellow |
| Address: |
5323 Harry Hines Blvd.
Dallas, Texas 75390 |
| Office: |
ND10.214 |
| Phone: |
214-645-6366 |
| Fax: |
214-645-6353 |
| Email: |
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Education:
- Ph.D. - Physics - Univ. of Warsaw, Poland, 2001
- M.Sc. - Physics - Univ of Warsaw, Poland, 1995
Research Interests:
- computational biology & bioinformatics
- protein crystallography & modeling
- mathematical physics
PEER-REVIEWED PUBLICATIONS:
Computational biology & bioinformatics:
Rowicka M, Kudlicki A, Tu BP, Otwinowski, Z: "High-resolution timing of cell cycle-regulated gene expression " Proc Natl Acad Sci USA, 104 (43), 16892-16897 (2007) Webpage
A. Kudlicki, Rowicka, M., Otwinowski, Z: "SCEPTRANS: an online tool for analyzing periodic transcription in yeast " Bioinformatics, 23 (12): 1559-1561, (2007) Webpage
C. Wojcik, M. Rowicka, A. Kudlicki, D. Nowis, E. McConnell, M. Kujawa, G. DeMartino: "Valosin-containing Protein (p97) Is a Regulator of Endoplasmic Reticulum Stress and of the Degradation of N-End Rule and Ubiquitin-Fusion Degradation Pathway Substrates in Mammalian Cells " Mol. Biol. Cell, 17, 4606-4618 (2006)
B. P. Tu, A. Kudlicki, Rowicka, M., McKnight S.L.: "Logic of the yeast metabolic cycle: Temporal compartmentalization of the cellular processes " Science, 310, 1152-1158 (2005)
Webpage
Protein crystallography & modeling:
Kudlicki, A., Rowicka, M., Otwinowski, Z.: The crystallographic fast Fourier transform. V. The recursive symmetry reduction. Acta Cryst. A 63, 465-480 (2007).
Kudlicki, A., Rowicka, M., Gilski, M., Otwinowski, Z.: An efficient routine for computing symmetric real spherical harmonics for high orders of expansion. J. Apllied Cryst. A 38, 501-504 (2005).
Rowicka, M., Kudlicki, A., Zelinka, J., Otwinowski, Z.: Coordinate transformations in modern crystallographic computing. Acta Cryst. A 60, 542-549 (2004).
Kudlicki, A., Rowicka, M. Otwinowski, Z.: The crystallographic fast Fourier transform. IV. FFT-asymmetric units in the reciprocal space. Acta Cryst. A 60, 146-152 (2004).
Rowicka, M., Otwinowski, Z,: Application of Maximum Entropy principle
to modeling torsional angle distribution in proteins, Proceedings
of the 23rd annual conferecen on Bayesian methods in science and
engineering. (2003)
Rowicka, M., Kudlicki, A., Otwinowski, Z.: The crystallographic fast Fourier transform. III. Centred lattices, Acta Cryst. A 59, 183-192, (2003), PDF
Rowicka, M., Kudlicki, A., Otwinowski, Z.: The crystallographic fast Fourier transform. II. One-step symmetry reduction (2003), PDF
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Rowicka, M., Kudlicki, A., Otwinowski, Z.: The crystallographic fast Fourier transform. I. p3 symmetry, Acta Cryst. A, 58, 574-579, (2002) PDF
Mathematical physics:
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